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SRX26889371: Tachyglossus aculeatus PacBio CLR sequencing
1 PACBIO_SMRT (Sequel) run: 5.4M spots, 107.9G bases, 25.3Gb downloads

Design: PacBio manufacturer's protocol
Submitted by: G10K
Study: Tachyglossus aculeatus (Short-beaked echidna) genome, mTacAcu1, sequence data
show Abstracthide Abstract
The short-beaked echidna (Tachyglossus aculeatus) is a monotreme mammal found in Australia, which lays eggs. This assembly has been produced as part of the VGP Project and a BGI project on mammal evolution. Sequencing was conducted with PacBio long reads, Bionano optical maps, and 10X Genomics linked reads at Duke University and the Rockefeller University Vertebrate Genomes Lab led by Olivier Fedrigo, HiC by BGI, and Illumina sequencing. Genome assembly was conducted by Gregory Gedman and Giulio Formenti using the VGP 1.6 pipeline. The primary haplotype was assembled to chromosomes, whereas the alternate as contigs only. Genome coordination and funding was by Guojie Zhang and Erich Jarvis. The raw data and assembly are currently under a G10K-VGP publication embargo until removed from this description, following the G10K data use policy at the following URL: https://genome10k.soe.ucsc.edu/data-use-policies/
Sample: Animal sample from Tachyglossus aculeatus
SAMN12634963 • SRS23369471 • All experiments • All runs
Library:
Name: mTacAcu_PacBio_CLR_bam_94
Instrument: Sequel
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: SINGLE
Runs: 1 run, 5.4M spots, 107.9G bases, 25.3Gb
Run# of Spots# of BasesSizePublished
SRR315217985,442,437107.9G25.3Gb2024-11-27

ID:
36323167

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